On Wed, Jun 5, 2013 at 12:12 PM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:
what was your original mri_glmfit-sim command?
mri_glmfit-sim --glmdir GLM --sim perm 20000 2 perm.abs.2 --sim-sign abs
--overwrite
Then, I tried no-sim on the generated csd file with the following command:
mri_glmfit-sim --cwpvalthresh 0.99 --glmdir GLM --no-sim --overwrite /csd/perm.abs.2.j001-osgm.csd