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________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Lilla Zollei lzollei@nmr.mgh.harvard.edu Sent: Friday, October 25, 2019 8:41 AM To: Freesurfer support list Subject: [EXT] Re: [Freesurfer] Thalamic subnuclei color table
Hi Anna,
See attached.
Lilla
On Fri, 25 Oct 2019, Crawford, Anna wrote:
External Email - Use CautionHello,
Just a quick question. We recently installed the new thalamus segmentation subroutine. It's really wonderful, and much promise to our work.
I can't find a lookup table with the numerical labels from the FS output to the thalamic nuclei. The numbers around between 8103-8133 on the right, and 8203 and 8233 on the left. Can you point me in the right direction for this?
For other FS segmented volumes I always use the following, but it doesn't include these thalamic subnuclei
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI/FreeSurfer...http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI/FreeSurferColorLUT
Thank you, Anna
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