We don't usually use mri_glmfit for this kind of thing. If you want to do it this way, then you cannot use an FSGD file. Instead, create a design matrix with the seed time course then pass that to mri_glmfit with the --X option (and no --fsgd option).
On 05/04/2016 10:17 AM, Eun Young Choi wrote:
Hi all,
I'd like to run a resting-state fcMRI analysis within the GLM (mri_glmfit), but I'm not completely sure how to set this up in the FSGD file. I've seen the online tutorial of age vs cortical thickness, but I'm not sure how to specify a regressor with a timeseries. Does anyone have an example of an FSGD file for this?
Thanks! Eun Young
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