Could be that you reached a memory limit? If the same analysis runs fine on your computer, then it's probably a cloud issue, not a TRACULA issue. ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Shanika Jayakody shanika.jayakody@einsteinmed.edu Sent: Thursday, July 21, 2022 3:58 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Tracula error in path construction
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Dear Anastasia I am running tracula on FreeSurfer 7.2. It worked fine on a linux computer now I am changing to a Cloud workstation. Attached is my Configuration file. For this person the pipeline worked without errors until path reconstruction but exists saying the following I have checked my bvecs and bvals in the subjects directory and also in dmri Any suggestion for me to try would be great-thanks so much! I tried to attach the trac-all log file but then the email is too big to be posted. Oshadi
Loading DWIs from /gs/gsfs0/users/helena_blumen_lab/TRACULA//30018/dmri/data.nii.gz Loading mask from /gs/gsfs0/users/helena_blumen_lab/TRACULA//30018/dlabel/diff/aparc+aseg_mask.bbr.nii.gz Loading BEDPOST parameter samples from /gs/gsfs0/users/helena_blumen_lab/TRACULA//30018/dmri.bedpostX Killed Linux sjayakody 4.18.0-348.el8.x86_64 #1 SMP Mon Oct 4 12:17:22 EDT 2021 x86_64 x86_64 x86_64 GNU/Linux