External Email - Use Caution
What happems if you type 'mri_ca_label' in your shell?
Did you setup your PATH environment variable to include the Freesurfer binary directory?
Tim
On August 23, 2020 at 9:34 AM Jie Zhao zjuzhaojie@zju.edu.cn wrote:
External Email - Use CautionDear freesurfer developer:
I am using Freesurfer 7.1.1 and encounter an error like this when using recon-all :
zhao@zhao-VirtualBox:~$ export SUBJECTS_DIR=/usr/local/freesurfer/subjects zhao@zhao-VirtualBox:~$ recon-all -s test4 -i sample-002.nii.gz -autorecon1 Subject Stamp: freesurfer-linux-centos6_x86_64-7.1.1-20200723-8b40551 Current Stamp: freesurfer-linux-centos6_x86_64-7.1.1-20200723-8b40551 INFO: SUBJECTS_DIR is /usr/local/freesurfer/subjects Actual FREESURFER_HOME /usr/local/freesurfer Linux zhao-VirtualBox 4.15.0-20-generic #21-Ubuntu SMP Tue Apr 24 06:16:15 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux Segmentation fault ERROR: Executable 'mri_ca_label -all-info failed! Is it missing from the distribution?'
What can I do to fix this? Thanks
Best regards
Jie Zhao
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