Hi Doug and Freesurfers,
I encountered an error during preproc-sess (Stable 5) that I have never seen before:
ERROR: cannot find AFNI command 3dvolreg
The commands I entered were:
setenv USE_STABLE_5_0_0 source /usr/local/freesurfer/nmr-stable50-env setenv SUBJECTS_DIR /cluster/roffman/users/Stable5_PerRun cd $SUBJECTS_DIR preproc-sess -s MTH20100AA -fwhm 5 -per-run
I've run this set of commands many times without this problem, so did something change or am I missing something simple?
Adam Nitenson, B.S. Brain Genomics Lab Massachusetts General Hospital nitenson@nmr.mgh.harvard.edu Phone: 617-643-3215