Re: [Freesurfer] cluster and FS new-version adaptation

Hi Alex

1) depends on how many CPUs you have and how much memory is on them. We have run hundreds of recons at the same time on our cluster.

2) This depends on whether you want to keep your old edits or not.

cheers Bruce

On Mon, 30 May 2011, Alexandru Hanganu wrote:

Dear Freesurfer experts,

1. How many simultaneous processing can be done on a cluster ? I did 20

analysis at the same time, and it worked. They all finished without error. (didn't find this question on the list)

2. In order to adapt the previous subject analysing to the new FS-5.1, must

I use the tags: -clean-bm -clean-tal (i.e. recon-all -subjid SUBJ -autorecon1 -clean-tal -clean-bm)

Seems that the new analysis doesn't overwrite the previous data.

Thank you in advance, Alex.