25 Aug
2017
25 Aug
'17
10:08 a.m.
Hi Mateus
you need to send us your command lines and screen output. If you do it properly (recreating brainmask.mgz), then yes, the new masking should be used in everything
cheers Bruce On Fri, 25 Aug 2017, MATEUS ROZALEM ARANHA wrote:
Hi! When I run recon-all on my data, some skull and dura is left behind and affects the surfaces and the parcellation. I re-run the data using a lower watershed (I tried 20, 15, 10 and 05). The brainmask changed, but the remaining skull still affects the parcellation and surfaces. My doubt is: when I re-run my data using a lower watershed value, does it automatically create new surfaces and volumes or not? If not, how can I reset it?
Best Mateus