External Email - Use Caution
Hello Freesurfer,
I did changes asked by you but still error persists. While i am using dicom images why it is asking for NIFTI format. I checked the lib folder also and checked and all the files mention above are there in the folder. Do i need to check something else.
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On 22-Oct-2019, at 8:01 AM, Yendiki, Anastasia AYENDIKI@mgh.harvard.edu wrote:
Hi Nayan - Try using /Applications instead of $Applications everywhere. Also, the config file seems to be in rich text format - not sure how that'll work. Try converting it to plain text (if you use mac, from the Format menu of the text editor).
Best, Anastasia. From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of nayan wadhwani nayanw775@gmail.com Sent: Saturday, October 19, 2019 1:36 AM To: Freesurfer@nmr.mgh.harvard.edu Freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] trac-all error
External Email - Use CautionHello Freesurfer, After running recon all script which completed successfully, I ran trac-all command which exited with error and tried running it with dicom files. dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: ___emutls_get_address Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib Expected in: /usr/lib/libSystem.B.dylib
Abort ERROR: input file must be in NIfTI format Darwin EPILEPSY 16.7.0 Darwin Kernel Version 16.7.0: Mon Nov 13 21:56:25 PST 2017; root:xnu-3789.72.11~1/RELEASE_X86_64 x86_64
trac-preproc exited with ERRORS at Fri Oct 18 22:13:02 PDT 2019
And please help me the correct config the one I created, I am attaching it below to try it with .nii files Thanks and Regards Nayan Wadhwani _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer