yes, the surface you specify only matters for surface area.
Bruce
On Tue, 30 Mar 2004, Keyma Prince wrote:
So when you run it with the default ?h.white surface then it is computing the surface area of white matter? I'm confused then on what it is computing for the thickness, is this still the distance between the gray and white matter?
-Keyma
Keyma Prince Massachusetts Institute of Technology Department of Brain and Cognitive Sciences NE20-392 Cambridge, MA 02139
On Tue, 30 Mar 2004, Bruce Fischl wrote:
Hey Keyma,
the default surface is ?h.white. You can specify a different one (such as pial) by including it as the 3rd command line argument.
cheers, Bruce
On Tue, 30 Mar 2004, Keyma Prince wrote:
When you look at the values that are produced by mris_anatomical_stats for surface area, are these values the same as pial surface area?
Is the pial surface the same as the inflated surface?
-Keyma _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu http://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer