Hi Richard and others, I installed the earlier driver and the toolkit, but I sill have the same crash. A portion of the log just before the crash is below. Any thoughts ? Hemant mri_em_register_cuda -skull nu.mgz /usr/local/freesurfer/average/RB_all_withskull_2008-03-26.gca transforms/talairach_with_skull.lta
nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2010 NVIDIA Corporation Built on Thu_Nov__4_12:44:17_PDT_2010 Cuda compilation tools, release 3.2, V0.2.1221
Driver : 3.20 Runtime : 3.20
Acquiring CUDA device Using default device CUDA device: Quadro FX 4600 aligning to atlas containing skull, setting unknown_nbr_spacing = 5 reading 1 input volumes... logging results to talairach_with_skull.log reading '/usr/local/freesurfer/average/RB_all_withskull_2008-03-26.gca'... gcaAllocMax: node dims 64 64 64 gcaAllocMax: prior dims 128 128 128 gcaAllocMax: max_labels 0 average std = 23.1 using min determinant for regularization = 53.4 0 singular and 5702 ill-conditioned covariance matrices regularized reading 'nu.mgz'... freeing gibbs priors...done. bounding unknown intensity as < 20.2 or > 943.7 total sample mean = 92.0 (1443 zeros) ************************************************ spacing=8, using 3481 sample points, tol=1.00e-05... ************************************************ CUDA Error in file '/space/freesurfer/build/minerva/stable/dev/include/ctfactory.hpp' on line 92 : invalid texture reference. register_mri: find_optimal_transform find_optimal_transform: nsamples 3481, passno 0, spacing 8 Abort (core dumped) Linux Lab-3.intelect.local 2.6.32-71.29.1.el6.x86_64 #1 SMP Mon Jun 27 19:49:27 BST 2011 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s 209 exited with ERRORS at Tue Oct 25 17:13:11 EDT 2011
For more details, see the log file /home/hemant/FreeSurferSubjects/209/scripts/recon-all.log To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
On Tue, Oct 25, 2011 at 8:41 AM, R Edgar freesurfer.rge@gmail.com wrote:
On Mon, Oct 24, 2011 at 9:28 PM, Hemant Bokil hemantbokil@gmail.com wrote:
Thanks for the response. Does this mean that I should use CUDA 3.2 ?
There
was some discussion on the group recently about Freesurfer not working
with
CUDA 4 and one suggestion made was to switch to CUDA 3.2. Thanks,
Probably. NVIDIA always like to claim full backwards compatibility, but I've never been fully convinced.
Richard _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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