In FreeView, go to "View/Edit". From the resulting interface, you can turn on and off any parcellations you want.
On 7/5/2021 1:04 PM, Ellen Ji wrote:
External Email - Use CautionDear experts,
I have a basic visualization question. I would like to create a surface brain figure with specific cortical parcels colored. Similar to https://secure-web.cisco.com/1DryTPj2WrD-LULa8TF6HVh2xwKTLAaWDFvIpAUrs4z6O2V... but not with ALL parcels in the atlas selected.
I know that I can go into a subject folder and load this freeview -f surf/lh.pial:annot=aparc.annot in order to see the entire Desikan Killiany atlas. However, I would like to select 4-5 rois.
What's the best way to do this? It won't be related to any results and doesn't need to be from a particular subject's brain (can also be fsaverage). It's purely to highlight some cortical parcels for visualisation purposes.
Thanks, Ellen
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer