Dear Ruopeng, Thanks for your help, Ruopeng.I learned the groupanalysis by manu of http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. I ran this command on your tutorial data (buckner data). Would you please tell me where my hardware setup is inappropriate? Thanks. All the best.
2014-01-01
Rujing Zha
发件人：Ruopeng Wang rpwang@nmr.mgh.harvard.edu 发送时间：2014-01-01 00:16 主题：Re: [Freesurfer] Fwd: freeview error 收件人："rujing cha"charujing@gmail.com 抄送："charujing123"charujing123@163.com,"freesurfer"freesurfer@nmr.mgh.harvard.edu
Hi Rujing,
Your hardware setup does sound a bit insufficient to run freeview smoothly. But I don't think that is the reason "configure overlay" hangs. Would it be possible to send us the files used in your command?
Best, Ruopeng
On Dec 31, 2013, at 1:04 AM, rujing cha charujing@gmail.com wrote:
Hi Bruce and others, Thanks Bruce. I had installed the centos6.5 x86_64 in my computer, and setup the freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.tar.gz, and I setup the nvidia drivers completely. Then I tried to run this command: freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:overlay=lh.gender_age.glmdir/lh-Avg-thickness-age-Cor/mc-z.negative.sig.cluster.mgh:overlay_threshold=2,5:annot=lh.gender_age.glmdir/lh-Avg-thickness-age-Cor/mc-z.negative.sig.ocn.annot . It did present the underlay(lh.inflated),overlay and annot, but it suspended when I click the button "configure overlay". Then freeview were suspended. The CPU ran "100%",and memory ran "23%". There was nothing to do but terminated it manually in the command console by "ctrl + c". I want to know why I cannot configure overlay. Is it a poor graphic card or CPU or memory? My graphic card is "NVIDIA GeForce 8600 GT", and CPU is "Intel(R) Core(TM)2 Quad CPU Q6600 @ 2.40GHz 2.40GHz", and RAM is 2.00G. Thanks Bruce and others. All the best. 2013-12-30
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