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Hi Andrew, I commented out the LD_LIBRARY_PATH from my .bashrc and that worked.
Thanks!
Corinna
On Wed, Sep 1, 2021 at 10:53 PM Hoopes, Andrew AHOOPES@mgh.harvard.edu wrote:
Hi Corinna,
Do you happen to have the LD_LIBRARY_PATH environment variable set in your shell? If so, I would unset it. LD_LIBRARY_PATH tends to mess with any programs linked to dynamic libraries. In this case, it’s forcing freeview to load the wrong matlab Qt libraries.
Andrew
*From: *freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Corinna Bauer < corinnab83@gmail.com> *Date: *Wednesday, September 1, 2021 at 4:58 PM *To: *Mailing Freesurfer List freesurfer@nmr.mgh.harvard.edu *Subject: *[Freesurfer] matlab runtime error
External Email - Use Caution *Hi all,
I ran a few subjects successfully through7.1.1, but when I got to check the surfs in freeview I get an error about the Matlab runtime libraries below. However, I already have those libraries and the 2014b runtime environment installed on my Ubuntu 18.04.
freeview: /usr/local/MATLAB/MATLAB_Runtime/v97/bin/glnxa64/libQt5X11Extras.so.5: no version information available (required by freeview) freeview: /usr/local/MATLAB/MATLAB_Runtime/v97/bin/glnxa64/libQt5Core.so.5: no version information available (required by freeview) freeview: /usr/local/MATLAB/MATLAB_Runtime/v97/bin/glnxa64/libQt5Gui.so.5: no version information available (required by freeview) freeview: /usr/local/MATLAB/MATLAB_Runtime/v97/bin/glnxa64/libQt5Widgets.so.5: no version information available (required by freeview) freeview: relocation error: freeview: symbol _ZN17QAbstractItemView11eventFilterEP7QObjectP6QEvent version Qt_5 not defined in file libQt5Widgets.so.5 with link time reference
I also tried re-installing the 2014b MCR, but get this message:
fs_install_mcr R2014b curl: /usr/local/MATLAB/MATLAB_Runtime/v97/bin/glnxa64/libcurl.so.4: no version information available (required by curl) curl: (48) An unknown option was passed in to libcurl
Let me know how to best proceed.
Thanks!
Corinna
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