you can use mri_convert, eg
mri_convert aparc+aseg.mgz aparc+aseg.nii
Matthew A. Garlinghouse wrote:
Hi,
New to Freesurfer. Is it possible to export specific cortical regions/surfaces from the annotations file in a .nii or analyze image format?
Best,
Matt _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer