Hi Sierra,
the long command should be
recon-all -long C002d C002.base -mprage …..
same way as you called it the first time when using the -all flag.
Best, Martin
On 8. Jun 2019, at 20:28, Sierra Ann Jarvis jarvis.sierra7@gmail.com wrote:
External Email - Use CautionHello Freesurfers,
I am trying to apply Pial edits to my longitudinal time point. I have tried the command,
recon-all -long C002d.long.C002.base/ C002.base -mprage -3T -norm2-b 20 -norm2-n 5 -autorecon2 -autorecon3
But receive the error,
Unmatched “.
I am using freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
Do you know what could be the reason for this? Sierra _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer