Dear Erik, As of today, we don’t have a subdivision of the molecular layer. An option would be to use some geometric/heuristic rules to subdivide the molecular layer, but we haven’t implemented anything like that. Cheers, /Eugenio
Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
On 19 Jun 2017, at 08:20, Erik Lindberg <erikoloflindberg@gmail.commailto:erikoloflindberg@gmail.com> wrote:
Dear Freesurfer experts, I am currently running your new pipeline for hippocampal subfield segmentation. However the resolution on my MRI images is too bad for identifying specific cellular layers such as stratum moleculare. My preferred option would be not to divide the different subfields into different cellular layers and only have one volume for the presubiculum for instance. Is there any way I can know how much volume of the molecular layer that should be included into each separate subfield? So forinstance I can add the volume of subiculum with the volume of the molecular layer in the subicula Best Erik _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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