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Dear SAMSEG developers,
Is there an easy way/specific function to compute the total volumes (GM, WM and Total Brain) after the cross sectional processing pipeline has been run? I currently add the volumes specified here: MorphometryStats - Free Surfer Wiki (harvard.edu)https://secure-web.cisco.com/1TiZSqlkmJdSG6YomLyN1O5wCUsd9cdQzzIoKCQYS9WpviPI49_lorZ_PTx-cok1PIeuP8aWJ0IV6NMrcGfHODM2PLpH9RCWg-ln0Jg3_V6zwsh77nVZB4eIAR3Y-sri82P9wc_X4NwGgnapiZ_giZMZuqHSwm3ql2xGpURyF3CTBTmybLP1w9Cv7SbWp2TZhZkZnRB9yYZHo-e9S5TPVgg_igr4Am5G0FC_cGgwpO0coHVaAsMKqmpERVazbMNtYaLa3U6l0NChbwkbKfwL0wA/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FMorphometryStats However, adding the WM volumes (lhCerebralWhiteMatter + rhCerebralWhiteMatter + WM hypointensities) results in lower volumesthan the volumes found with FreeSurfer.
Thank you very much in advance!
Best regards, David
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David van Nederpelt, MSc. | PhD Candidate Radiology and Nuclear Medicine Amsterdam UMC, Location VUmc | PK -1 X 004 | De Boelelaan 1118, 1081 HZ Amsterdam, the Netherlands T: +31 20 444 6480 | E: d.vannederpelt@amsterdamumc.nlmailto:d.vannederpelt@amsterdamumc.nl http://secure-web.cisco.com/1EOtsCiWTwBLCVMkC2cEggLJndUZQC9bJDTTa84lDglqlKV1...http://secure-web.cisco.com/1adKHUXOwhS5An078rgDU8DhS5pGcVaF-bemoEwstJMOWdVUabumeQt88QmkYwOE3kfCZ-8_lvjT1X1-V1Eo6AXJ89-inf3J7_8Hq7ap-lsWJJ7CdjvSv_uktM_FCq9q5EXLZqluOtUJYH7r2lT81W4rNoyLexrlFs6yKzvswB9Qg6zE-qU-gOTrZffItevTNkm6Ooq0nTvN3BEC5QZyuQWyItVe3n6kWyzrThd3oC_9paZLP3Am-gKokAHogtYsk_0mXns8AXZjrlbNfwIXWqA/http%3A%2F%2Fwww.amsterdamumc.nl%2F | http://secure-web.cisco.com/1MykofUmqPylr7OSHojIjyyuz3FqKchVPIVM4VJj6JPJzvTN...http://secure-web.cisco.com/1gpC425-YWhlfpRlTm0wPHu3H0yqPdczn6ZxyBZtVEFl5ebUfb06uOCJwi35aZzHN6tlHjOK_3iobh7nfKG7LJmH02eBZ7IDgEAwbrVAcTyBasa_68FddVYpW3crTDqp7RS58h8FuSRlik4bK217MDJ4OzwUFs4FSssz1TWot_wMqA2YHJ9iWExQWqemeLlzVKBUaiciX09g7D-MAysTlyTbEYuhIsuADj-Kx7tGXYFiCEIn1wizGeHsYt6kAhRGVnpx1Ut9IVVB8Zt4kx-s96A/http%3A%2F%2Fwww.vumc.nl%2F / http://secure-web.cisco.com/1IDr1ToLQ00j-N7JGdkZizZ2EY4BfRaX-Ni0bhB33BkT_pJt...http://secure-web.cisco.com/1wXJqt2HAZw1ZuD0nu0MtMhTFzaeK7O7CKFnLDqQmLsmS7l58-5sLp7UrEJJotSs2KHUEEDV0wnmawamcCbpdNxUYXyFRDmrCfVvAXYfn1z-X9oG_nKEEFfwxmSVlx3I2kiIhTAkw9tUfJaxHxMIJ8gpAVRPW_bFZUlAPQio1cFqorbuXJ4Jfho8WDOlD0apweEUKAcB6GHhQNmK-dB4Hmj7e_xkh5FcgWtJxGKnfr6Co4r4i8Y7WkBy0rslsakHVrM6fP8pup9FvmcHEnjwcSg/http%3A%2F%2Fwww.amc.nl%2F ______________________________________________________
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