[Freesurfer] converting binary cortical GM ribbon mask to mative T1 space

Hi,

We'd like to map the cortical GM ribbon on our original single volume native space anatomical T1. The dataset has been run through recon-all -all.

The 'rawavg.mgz' or '001.mgz' is the native space T1 and 'ribbon.mgz' is the cortical GM mask in freesurfer space, correct? I converted the ribbon.mgz to native T1 space using: mri_label2vol --seg ribbon.mgz --temp rawavg.mgz --o ribbon-in-rawavg.mgz --regheader ribbon.mgz

Is this the correct procedure?

Thanks. Jim

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