[Freesurfer] Fw:nu_correct error

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Oops, forget about the log file.  Here it is

------------------&nbsp;Original&nbsp;------------------ From: "xuan" <pearl940311@foxmail.com&gt;; Date:&nbsp;Wed, Dec 15, 2021 08:28 PM To:&nbsp;"freesurfer"<freesurfer@nmr.mgh.harvard.edu&gt;;

Subject:&nbsp;nu_correct error

Dear FreeSurfer Experts,

I am attempting to recon-all for my one subject for testing on my lab server. However, I get following error:

ncopen: filename "./tmp.mri_nu_correct.mni.13492/nu1.mnc": Not a netCDF file miopen: MINC package entry point Error opening ./tmp.mri_nu_correct.mni.13492/nu1.mnc mincRead(): error reading volume from file ./tmp.mri_nu_correct.mni.13492/nu1.mnc $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.13492/nu1.mnc...

And here is the relevant information: (1)FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c (2)Platform: Linux node-1-3 4.4.0-62-generic #83-Ubuntu SMP Wed Jan 18 14:10:15 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux (3)log file: please see attached file.

Thanks for the help!

Best, Xuan

Xuan Bu, Ph.D.

State Key Laboratory of Cognitive Neuroscience &amp; Learning Beijing Normal University Email: pearl904311@foxmail.com Webpage: http://secure-web.cisco.com/1sAYTPWqEOYnQckeJw_qP7iUC93VX2nG1YJZE_-U3zUgEnaO...