Dear Zheng, Can you please send us the log files? Kind regards, /Eugenio
-- Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of 郑凤莲 zhengfenglian0105@163.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Wednesday, 7 August 2019 at 21:19 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Hippocampal subfields
External Email - Use Caution Hi exports,
I am using FS6.0 to segment hippocampus. I run "recon-all -s bert -hippocampal-subfields-T1" and it said "recon all bert finished without error". However, in mri directory, there is no l(r)h.hippoSfLabels-T1.v10.mgz file. And in tmp directory, there are two directories, "hippoSF_T1_v10_left" and "hippoSF_T1_v10_right". But in these two directories, the l(r)h.hippoSfLabels-T1.v10.mgz file is still not exsit. What's the matter? I need your help. Thanks very muxh in advance.
Sincerely, Zheng