Dear friends,
I am following this procedures to plot a 3D rendering of the AAL volume (https://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg27707.html).
My problem is the following. When I execute this command:
mri_cor2label --i lh.Colin27_aal2std.mgh --id 75 --l lh_Pallidum_L
specifically for the ROI Pallidum, a subcortical ROI, I receive the following error
$Id: mri_cor2label.c,v 1.12 2011/03/02 00:04:14 nicks Exp $ Loading mri lh.Colin27_aal2std.mgh Loading /Applications/freesurfer/subjects/FS_spm_CanonicalBrain/surf/lh.white Scanning the volume Found 0 label voxels ERROR: found no voxels matching id 75
This happens both for Pallidum Left and Pallidum Right, but all other AAL ROI work fine. I have an almost complete 3D rendering for my AAL. Only these subcortical regions are missing.
Someone knows what could be happening?
Thanks for the help.
best,
-- João V. Dornas Phd student in Neuroscience Cognitive Biology Group, Institute of Biology Otto von Guericke University, Magdeburg Germany