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Hi Paul,
Not sure what command I should run when I edit the brainmask because the pial got too much.
Kind regards, Rosie
On Thu, Jul 8, 2021 at 6:13 PM Paul Wighton paul@corticometrics.com wrote:
External Email - Use CautionHi Rosie,
It is my first time editing wm segmentation (white matter segmentation errors + topological errors).
I wonder if there is a good tutorial on which I could rely.
There are a few tutorials that may be helpful (a full list of tutorials is here *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1KKtU14lfEF2p4D2eFjLuFeNgwDDSY3YYh8tQDtHUAaGyqD... https://secure-web.cisco.com/1rODvJs1ai8ocaVd_PRpeTFJnXk0wukmSM7yCNRCloKKL4ZPQZOCVExtqPxRRAOWBluRDRjQqno9QrifD6CT8o6C91nxLIK51ygwiD_a39suQIFvjfTIAwewDsrBzOPd0KafjQda5FJFwreS1HTt1HosPKu8vwfBtxK_-pjMFsWnozXAMp9NfzqiKFBVYdRwC2tKzjM4egHuUwi4z9lf6LD2g73pypGrmcJy2WLqaqKyrv8HZQznR_0PD-S2Yvn_wIR0dwiBFmkDXRxUl-Q8v_w/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FTutorials )
- Introduction to Freesurfer Output (*MailScanner has detected a possible
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- Troubleshooting your output (*MailScanner has detected a possible fraud
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- Quality Check a FreeSurfer Recon Demo (*MailScanner has detected a
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Also, I have read there is an example of segmentation that comes with
FreeSurfer that is called Bert. I think it would be great to have it so I can look at it as a good example.
There should be an example that comes with the FreeSurfer installation. I can't remember exactly what comes with v6, but you should find more info with `cat $FREESURFER_HOME/subjects/README`
Good luck!
-Paul _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1DHbxGoPwPUUJCixsnh0mQrCQIauHUV98bwCgaNLKb83X09...