Hi - sorry if this is a stupid question, but when I use the latest recon-all I get the lh.sphere.reg fine but not the rh - the final listing is:
..... -rw-rw-r-- 1 steve analysis 563291 Feb 8 09:31 lh.thickness -rw-rw-r-- 1 steve analysis 5070714 Feb 8 09:31 lh.smoothwm -rw-rw-r-- 1 steve analysis 563291 Feb 8 09:34 lh.sulc -rw-rw-r-- 1 steve analysis 5071028 Feb 8 09:34 lh.inflated -rw-rw-r-- 1 steve analysis 5071339 Feb 8 11:42 lh.sphere -rw-rw-r-- 1 steve analysis 5071734 Feb 8 12:54 lh.sphere.reg -rw-rw-r-- 1 steve analysis 5071746 Feb 8 14:02 lh.rh.sphere.reg -rw-rw-r-- 1 steve analysis 563291 Feb 8 14:02 lh.avg_curv -rw-rw-r-- 1 steve analysis 3485297 Feb 8 14:09 rh.orig.nofix -rw-rw-r-- 1 steve analysis 2614948 Feb 8 14:10 rh.smoothwm.nofix -rw-rw-r-- 1 steve analysis 2615288 Feb 8 14:13 rh.inflated.nofix -rw-rw-r-- 1 steve analysis 2615615 Feb 8 14:37 rh.qsphere.nofix -rw-rw-r-- 1 steve analysis 580459 Feb 8 14:39 rh.defect_labels -rw-rw-r-- 1 steve analysis 580459 Feb 8 14:39 rh.defect_chull -rw-rw-r-- 1 steve analysis 580459 Feb 8 14:39 rh.defect_borders -rw-rw-r-- 1 steve analysis 5055170 Feb 8 20:54 rh.orig -rw-rw-r-- 1 steve analysis 121 Feb 8 20:54 mris_make_surfaces.rh.mrisurf.c.version -rw-rw-r-- 1 steve analysis 5055491 Feb 8 22:07 rh.white -rw-rw-r-- 1 steve analysis 561635 Feb 8 22:08 rh.curv -rw-rw-r-- 1 steve analysis 561635 Feb 8 22:08 rh.area -rw-rw-r-- 1 steve analysis 5055491 Feb 8 22:53 rh.pial -rw-rw-r-- 1 steve analysis 561635 Feb 8 22:53 rh.curv.pial -rw-rw-r-- 1 steve analysis 561635 Feb 8 22:53 rh.area.pial -rw-rw-r-- 1 steve analysis 561635 Feb 8 23:01 rh.thickness -rw-rw-r-- 1 steve analysis 5055810 Feb 8 23:01 rh.smoothwm -rw-rw-r-- 1 steve analysis 561635 Feb 8 23:04 rh.sulc -rw-rw-r-- 1 steve analysis 5056124 Feb 8 23:04 rh.inflated -rw-rw-r-- 1 steve analysis 5056435 Feb 9 00:53 rh.sphere
looking at the supplied bert it does look like rh.sphere.reg should be there - am I being dumb? Cheers, Steve.
------------------------------------------------------------------------ ------------------ Stephen M. Smith, Professor of Biomedical Engineering Associate Director, Oxford University FMRIB Centre
FMRIB, John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK +44 (0) 1865 222726 (fax 222717)
steve@fmrib.ox.ac.uk http://www.fmrib.ox.ac.uk/~steve ------------------------------------------------------------------------ ------------------