Hi Nathan,
Can you confirm that the error was from mri_robust_template?
Not sure what your command line options. I think these options ‘—inittp <>’, ‘--fixtp’, ‘—seed <>’ might help.
Best,
Yujing
-------- Forwarded Message -------- Subject: [Freesurfer] Issue with rotation during longitudinal base creation Date: Wed, 12 Oct 2022 16:54:29 +0000 From: Nathan Kindred (PGR) N.Kindred1@newcastle.ac.ukmailto:N.Kindred1@newcastle.ac.uk Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu To: freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu
External Email - Use Caution Hi,
I have been processing longitudinal data using the longitudinal processing stream but for some subjects I am having getting this error when creating the base:
Input rotation's max deviation from rotation is: 0.000258493 MyMatrix::RotationMean input(s) not rotation
What would be the best way to fix this?
Best, Nathan