Re: [Freesurfer] cortical recontruction error

I'm sorry, I did mean the moderator of Freesurfer mailing list.

2013/3/25 Bruce Fischl fischl@nmr.mgh.harvard.edu

you should be able to use our ftp site or file drop. Which administrator do you mean?

On Mon, 25 Mar 2013, Claudia Dacquino wrote:

I was trying, but the administrator did reject that, because the file is

...

too big.

2013/3/25 Claudia Dacquino claudia.dacquino@gmail.com Hi Bruce, I'll try to upload dataset. Thanks, Claudia

  2013/3/23 Bruce Fischl <fischl@nmr.mgh.harvard.edu>
        Hi Claudia

        hmmm, someone else mentioned that mri_cc hangs for them but

we've never seen it. If you upload your dataset I'll see if we can replicate the problem Bruce On Fri, 22 Mar 2013, Claudia Dacquino wrote:

              Dear Freesurfers,
              I'm new and I'm starting using Freesurfer.
              I'm having a problem with one subject, during the

cortical reconstruction (recon-all) the process stops at this stage:

              mri_cc -aseg aseg.auto_noCCseg.mgz -o aseg.auto.mgz

<subjid>

              at this point:

              final transformation (x=128.0, yr=0.978, zr=0.153):
               1.000  -0.003   0.017  -1.456;
               0.003   1.000   0.000   8.654;
              -0.017   0.000   1.000   25.201;
               0.000   0.000   0.000   1.000;

              without giving me any error message, it just stops.

              Do you have some ideas for why it happens?

              thanks to everyone,
              Claudia

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