11 Sep
2014
11 Sep
'14
5:12 a.m.
Dear all,
I'd like to convert the aparc+aseg.mgz to nifti and use it in the space of the original MR image. The basic conversion from mgz to nifti works fine "mri_convert aparc+aseg.mgz aparc+aseg.nii". However if I reslice it in the space of the original MRI than something fails and even negative intensities are presented in the converted aparc+aseg2raw.nii file " mri_convert -rl rawavg.mgz -rt nearest aparc+aseg.mgz aseg+aparc2raw.nii". Any idea how to convert it?
Best Regards, Gabor