Re: [Freesurfer] Make functional ROI's from clusters

As Allison says, you can use the tools listed below. Alternatively, there is an easier way to do it in tksurfer.

1. Click on cluster you want to convert into a label. 2. Click on the "Custom Fill" button (little paint bucket pouring into a blue blob). This will popup a window 3. Click on the "Up to functional values below threshold" box, then "Fill". The cluster will temporarily turn white, then it will have a yellow border. You have just created a "label". 4. Save this label using the File menu.

doug

Allison Stevens wrote:

Alice, You might find this tutorial helpful: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriIndividua...

and mri_volcluster or mri_surfcluster

Allison