Hi Antonin,
It does look like something went seriously wrong with the skull strip. Talairach reg. looks fine, but not so much the brainmask.
I haven't done anything different for this subject from the regular pipeline. Is there a reason the skullstripping may have failed?
Best,
Elizabeth
On Tue, Aug 15, 2017 at 3:33 PM, Antonin Skoch ansk@ikem.cz wrote:
Dear Elizabeth,
I would guess that something went seriously wrong in the recon-all with your data. Does Talairach registration and skull strip look reasonable?
Antonin Skoch
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