Hi Lars,
how are you saving your ROIs? Our standard color table is in the file FreeSurferColorLUT.txt, but the .annot files usually have a color table embedded in them to make them self-contained.
cheers, Bruce On Mon, 4 Jun 2007, Lars M. Rimol wrote:
Hi, I have combined the Desikan parcellations into regions of interest, which I would like to visualize. So I need to create an ad hoc color coding scheme. In order to visualize the ROIs I would load a file equivalent to the ?h.aparca2005s.annot file, which would show the same color for those parcellations that belong to one and the same ROI. Which file contains those color definitions, or in other words which file do I need to modify in order to be able do that?
Tank you!