Hi Tetiana,
Could you please do
grep left_CA1 $FREESURFER_HOME/FreeSurferColorLUT.txt
and see what the result is? There have been some naming convention changes ("left_CA1 -> left-CA1", etc), so perhaps this is the problem?
Thanks,
Koen
On Thu, Dec 8, 2011 at 7:48 AM, Tetiana Dadakova tetiana.d@gmail.com wrote:
Dear FreeSurfer list,
I ran recon-all -bert -hippo-subfields, which finished without error. Now I try to open it with freeview using:
cd $SUBJECTS_DIR/bert/mri freeview nu.mgz \ -p-labels posterior_left_* posterior_Left-Hippocampus.mgz \ -p-labels posterior_right_* posterior_Right-Hippocampus.mgz \ -p-prefix posterior_ -p-lut $FREESURFER_HOME/FreeSurferColorLUT.txt
But get the following error: "Failed to load posterior_left_CA1.mgz". (posterior_left_CA1.mgz exists in bert/mri) Do you have an idea why it goes wrong?
Thank you, Tanja. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.