Dear Ian That sounds like a RAM issue. Did you try using the crop option? Cheers, /Eugenio
-- Juan Eugenio Iglesias http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Johnson, Ian ian.p.johnson@yale.edu Date: Monday, October 7, 2024 at 11:41 To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] mri_WMHsynthseg error: Killed 9
External Email - Use Caution Hello SynthSeg Experts,
I am having an issue when I run mri_WMHsynthseg. I have run the program many times before without any issues. I recently closed my terminal while updating my Mac and reopened it to run WMHsynthseg.
I have seen from previous posts that the "killed" error is because of an issue with RAM, but I have not run into this error in the past. The error occurs while on the "Pushing data through the CNN" step. There is no error message, terminal just prints "killed: 9"
Best, Ian J