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Hi Freesurfers,
I'm using the below command to extract GM values: mris_anatomical_stats -mgz \ -cortex label/lh.cortex.label \ -f stats/lh.250.aparc.pial.stats \ -b -a 250.aparc \ -c label/colortable.ctab \ $subject lh pial
Specifying "pial" which image does the command actually use? The mri/orig.mgz?
Thanks for your help! Stephanie
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