Hi,
In order to get the three BEMs for EEG/MEG 3D source reconstruction for subject X, I used mri_watershed with -atlas, -useSRAS and -surf options, which created the BEMs in X/bem/watershed/, but the inner_skull and the brain were significantly distorted.
I followed the tutorial on troubleshooting the surfaces in the X/surf/ folder, but that does not address fixing these BEMs, so I was wondering if anybody knows how to get around this problem.
Actually, what concerns us most is if it's possible to get at least the inner skull surface right, as we shall be using the pial surface in X/surf/ (downsampled from 150k vertices) for the brain instead of the mri_watershed output (but I did not find there an inner skull surface).
Thank you,
Silviu Podariu UNMC Omaha, NE