I'm hoping to push my legacy datasets (processed and edited in FSv4.0.5) through FSv5.0.0. After installing FSv5.0.0, I received an error that it didn't look like a legacy analysis (see below). [jjuranek@localhost subjects]$ recon-all -legacy -s SB_057_H21001 ERROR: you have specified -legacy, but this does not look like a legacy analysis.
My recon-all.log file for this subjid reports the following build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v4.0.5
How do I convince FSv5.0.0 that I am feeding it legacy data from FSv4.0.5? Have I skipped too many versions to use this -legacy flag?
Many thanks, Jenifer