2 Aug
2018
2 Aug
'18
12:23 p.m.
Hi Ortal
you need to send us the recon-all.log, otherwise we don't have the information we need to help you
cheers Bruce On Thu, 2 Aug 2018, Ortal Nakash wrote:
External Email - Use Caution
Hi,
I tried to run the recon-all command on a single participant on a high memory cluster by typing:
qlogin -q qlogin.himem.q -l h_vmem=20G,s_vmem=20G
recon-all -i 103_T1.nii.gz -s 103T -sd /data/jag/cnds/ortal/freesurftest/C103/ -all
- Most of the necessary files were created, however the aparc.a2009 files and the recon-all.done
file were not.
sincerely,
Ortal Nakash