Would you recommend using this command on the orig volume before I start the rest of the processing stream? Or can it be used further down the line?
-Keyma
Quoting Bruce Fischl fischl@nmr.mgh.harvard.edu:
YOU> Hi Keyma, YOU> YOU> I use fsl_rigid_register for this kind of thing, which is a wrapper Doug YOU> wrote to use FLIRT. It works quite well, and writes out a transform (and YOU> transforms the volume if you want). YOU> YOU> Bruce YOU> YOU> On Wed, 11 Aug 2004, Chekema Nayasha Prince wrote: YOU> YOU> > I would like to take 3 different scan volumes of the same subject and YOU> compare YOU> > their parcellation values. I want to make sure that motion between the YOU> scans YOU> > will not change the parcellation values. Is mri_motion_correct the YOU> proper tool YOU> > to use for aligning the scans before proceeding with the processing YOU> stream? YOU> > YOU> > -Keyma YOU> > _______________________________________________ YOU> > Freesurfer mailing list YOU> > Freesurfer@nmr.mgh.harvard.edu YOU> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer YOU> > YOU>