yep, you'll need a new version of mri_segstats, which you can find by following the thread that Louis posted doug On 02/26/2014 12:32 PM, Louis Nicholas Vinke wrote:
Hi Sabin, What command did you run? Sending the recon-all.log file in the scripts dir might be a little more helpful. It's failing because the ribbon.mgz does not exist which requires surfaces.
This thread might be relevant: http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg32876.html
-Louis
On Wed, 26 Feb 2014, sabin khadka wrote:
Hi Doug, I tried running autorecon2 after successful autorecon1, however it crashed. I could not figure out why it crashed and how to fix it. Any suggestions. I've attached log file of autorecon2
-Sabin
On Tuesday, February 25, 2014 10:47 AM, Douglas Greve greve@nmr.mgh.harvard.edu wrote:
You did not run it all the way through (you stopped at autorecon2) doug
On 2/25/14 9:00 AM, sabin khadka wrote:
Thanks Doug. recon-all.log is attached herewith.
On Monday, February 24, 2014 5:07 PM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
are you sure it did not fail? Can you post the recon-all.log file to the list?
On 02/24/2014 04:22 PM, sabin khadka wrote:
Hi all, I ran recon-all -all and all the subjects finished without any error. However in few subjects directory, labels sub-directory only have lh.cortex.label and rh.cortex.label and not other label files like *.label and *.annot. Could anyone help me on how to fix this.
-Sabin
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