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Hello, I'm a FreeSurfer beginner and would like to ask a question about Choi's stratium parcellations. I was doing a research to incoorporate the parcellations by Choi on my subjects' images to delve further to understand the distincitve characteristics of each parcels. I decided to use the Choi2012_7Networks_MNI152_FreeSurferConformed1mm_LooseMask.nii.gz. Since my images were on the standardized model from FSL, I transformed Choi's image to the MNI standard using FIRST of FSL. Since both images were now on the same MNI space, I viewed both of them on FSL to make sure that the Loose mask covered my image completely, but found that the tail bit of my image was a couple of pixels too longer than Choi's Loosened mask. Do you think there is a way that I can further "loosen" up Choi's image to fit my image? Or can you recommend me a different solution to this problem? I'll wait for your reply. Thanks!
Sincerely, Sooyun Cho.