I guess I'm not sure what you are trying to do. Can you elaborate?
On 12/3/15 6:24 PM, Sabrina Yu wrote:
Hi Doug,
Thanks for the quick reply. Is Xhemi only for measuring volumes for both hemispheres?
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg35097.html You mentioned editing pctsurfcon to set white matter and gray matter in this email thread here. Can this be used to measure of white matter intensity for lh only, and then rh only? This email thread sounded promising for what I need, but am also unsure of how to input set wm and gm commands.
Thanks, Sabrina
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Douglas N Greve greve@nmr.mgh.harvard.edu Sent: Thursday, December 3, 2015 2:31 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Left and right white matter intensity ratio
see if this tool is what you need. It allows you to map to the homolgous vertex on the contralateral hemisphere http://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi
On 12/03/2015 05:25 PM, Sabrina Yu wrote:
Hi there,
Would it be possible to use pctsurfcon to calculate the ratio of white matter signal intensity between left and right hemispheres?
Thank you Sabrina
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