Hello,
We are just interested in generating the white and pial surfaces without segmentation.
1. Are there additional switches for running mris_make_surfaces without aseg (for -white section) or apar.annot (for -pial section)? 2. We would like to control intensity values - can we specify tissue class cutoffs in mri_normalize and mri_ca_normalize?
Regards,
Sean Hatton, PhD Postdoctoral Scholar, Department of Psychiatry UC San Diego