30 May
2018
30 May
'18
2:35 p.m.
External Email - Use Caution
Hi Freesurfer email list,
I'm trying to get the midbrain mask from the brainstem segmentation pipeline into standard space, for use in analyzing some data in other modalities. I have labeled T1s in individual-space (it's a longitudinal pipeline). Does the brainstem atlas already exist somewhere in MNI-space as a mask? If so, where could I find it? I've found the ROI mesh data, but I don't know how to convert that into a voxel mask.
Thanks so much, -Dan Peterson