Hello there,
I'm trying to resample some thickness difference maps using mri_surf2surf. Unfortunately, I keep getting the following error:
------------------------------------------------------------------- [engram:Multispect] (nmr-std-env) mri_surf2surf --srcsubject 002_MEF_A \ --sval $SUBJECTS_DIR/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff.w \ --src_type curv \ --trgsubject 001_MEF_A \ --tval $SUBJECTS_DIR/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff_resampled_to_001_MEF_A.w \ --trg_type paint \ --hemi lh \ --surfreg sphere.reg
Registration surface changed to sphere.reg srcsubject = 002_MEF_A srcval = /space/engram/1/users/Multispect/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff.w srctype = curv trgsubject = 001_MEF_A trgval = /space/engram/1/users/Multispect/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff_resampled_to_001_MEF_A.w trgtype = paint surfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 Reading source surface reg /space/engram/1/users/Multispect/002_MEF_A/surf/lh.sphere.reg Loading source data Reading curvature file /space/engram/1/users/Multispect/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff.ÔC MRISreadCurvature: could not open /space/engram/1/users/Multispect/thickness/002_MEF_A-002_MPRAGE_A/surf/lh.thickness_diff.ÔC No such file or directory ERROR: reading curvature file -------------------------------------------------------------------
From the initial command output, it appears as though the paths are input correctly, but upon reading the file it appears to be trying to open "lh.thickness_diff.ÔC" instead of "lh.thickness_diff.w" and subsequently failing. Am I doing anything incorrectly here?
Thanks, Julien