External Email - Use Caution
Hi， I am sorry. In my recon_all folder, there isn't lh.white, rh.white,lh.pial and rh.pial files, so I can run below command freeview -v topo_defect_before/mri/brainmask.mgz \
topo_defect_before/mri/wm.mgz:colormap=heat:opacity=0.4:visible=0 \ -f topo_defect_before/surf/lh.white:edgecolor=yellow \ topo_defect_before/surf/lh.pial:edgecolor=red \ topo_defect_before/surf/rh.white:edgecolor=yellow \ topo_defect_before/surf/rh.pial:edgecolor=red \ topo_defect_before/surf/lh.orig.nofix:visible=0
Hope you can give me more advises. Thank you very much.
Greve, Douglas N.,Ph.D. DGREVE@mgh.harvard.edu 于2019年4月11日周四 下午11:23写道：
check out
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TopologicalDefect_freev...
On 4/11/19 10:58 AM, Abby tang wrote:
External Email - Use CautionHello FreeSurfer Developers, I'm attempting to recon-all subjects but for some of my subjects I get the following error when I run recon-all command: CORRECTING DEFECT 0 (vertices=18460, convex hull=3400, v0=4) XL defect detected... Killed Linux abby-virtual-machine 4.15.0-47-generic #50-Ubuntu SMP Wed Mar 13 10:44:52 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux I don't know how to check and amend ?h.orig.nofix. please give me some
commands in detail.
Thank you for your help.
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