Hi, there,
I ran a subject through FreeSurfer pipeline. I found that the size of left and right hippocampus in aseg.stats are larger than that of left and right hippocampus in wmparc.stats after step. 3.
If I want to compare the FreeSurfer segmented hippocampus with a manually traced hippocampus, which value I should use, the result from step.2 or step. 3?
Thanks a lot!
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