Bruce,
Until it is determined if there is enough interest, how do I obtain it for centos4_x86_64?
Thanks much, Wil
|-----Original Message----- |From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] |Sent: Friday, August 05, 2011 12:10 PM |To: Irwin, William |Cc: Christopher Luna; freesurfer@nmr.mgh.harvard.edu |Subject: RE: [Freesurfer] mri_segment optional flags problem | |Hi Wil | |we can certainly post it if there is enough interest. | |cheers |Bruce |On Fri, 5 Aug 2011, |Irwin, William wrote: | |> Hi Bruce- |> |> Is this fix going to be put on the site as a patch/fix download (e.g., |ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux- |centos4_x86_64/) or distributed on a per-user need? |> |> Thanks, |> Wil |> ____________________________________ |> William Irwin | Brain Imaging Coordinator UCSF | Memory and Aging |> Center |> 350 Parnassus Avenue, Suite 905 |> San Francisco CA 94143-1207 |> wirwin@memory.ucsf.edu | memory.ucsf.edu |> p: 415.476.1680 | f: 415.476.1816 |> |> |> |> |-----Original Message----- |> |From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] |> |Sent: Thursday, August 04, 2011 12:39 PM |> |To: Christopher Luna |> |Cc: freesurfer@nmr.mgh.harvard.edu |> |Subject: Re: [Freesurfer] mri_segment optional flags problem |> | |> |oops, I just fixed that. If you let us know what software/hardware |> |env you are using we'll give you an updated binary. |> | |> |Bruce |> | |> | |> |On Thu, 4 Aug 2011, Christopher Luna |> |wrote: |> | |> |> Hello, |> |> I'm trying to run mri_segment with some custom values in the |> |> optional flags, such as -p for setting the percentage threshold with a float |value. |> |> |> |> When I run the command though, |> |> "mri_segment -p 0.6 brain.mgz wm.seg.mgz" |> |> |> |> The command properly sets the threshold to 60%, but also takes the |> |> "0.6" to |> |be in the input file name instead of brain.mgz. |> |> |> |> Is there another option I'm missing? Or have I unfortunately |> |> stumbled upon |> |a small bug? |> |> |> |> Thanks, |> |> Christopher Luna |> |> MIT Brain and Cognitive Sciences, Class of 2012 Desimone Lab, |> |> McGovern Institute for Brain Research MIT Archery Club Alpha Kappa |> |> Psi Colony at MIT |> |> |> |> |> |> |> |> |> |> | | |The information in this e-mail is intended only for the person to whom it is |addressed. If you believe this e-mail was sent to you in error and the e-mail |contains patient information, please contact the Partners Compliance |HelpLine at http://www.partners.org/complianceline . If the e-mail was sent |to you in error but does not contain patient information, please contact the |sender and properly dispose of the e-mail.