Just use --meas volume instead of --meas area ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Sara Lyn saralyn543@gmail.com Sent: Thursday, November 19, 2020 12:41 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Group Analysis {Disarmed}
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Hi Jocelyn,
The links talk about measuring thickness and I’m trying to do a volumetric Group analysis using Glm. I was wondering if you could point me towards that.
Sara
On Thursday, November 19, 2020, Mora, Jocelyn S. <JSMORA@mgh.harvard.edumailto:JSMORA@mgh.harvard.edu> wrote: Hi Sara,
You may want to use asegstats2table. Follow these links to learn more about mris_preproc, mri_glmfit, and asegstats2table:
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Best, Jocelyn ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Sara Lyn <saralyn543@gmail.commailto:saralyn543@gmail.com> Sent: Wednesday, November 18, 2020 6:37 PM To: freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] Group Analysis
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Hi Freesurfer experts,
I was looking to run the three steps of group analysis-mris preproc, mri surf2surf using the measure volume and unsure of how to go about it since the wiki page talks about thickness only. I would appreciate any help.
Best, Sara