Hi Kaiming
you can use mris_thickness to create a nifti thickness file if you want. They might be able to read .mgz, I'm not sure.
cheers Bruce On Wed, 4 Dec 2013, Kaiming Yin wrote:
Dear FS guys, I have run the FS 5.3 and get thickness files e.g. lh.thickness and rh.thickness, could FSL read these? should we use files like nii instead of mgz, or is there some options for FSL to read mgz too?
Thanks, Kaiming