Hey Bruce,
Could you elaborate on what steps you would need to change the number of corpus callosum segments (and grow them laterally), and how to specify the outputs name/format/location?
Thanks,
Doug
Douglas Merkitch Neurological Sciences Rush University Medical Center
On Feb 19, 2018, at 11:11 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edumailto:fischl@nmr.mgh.harvard.edu> wrote:
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Hi Ben
we find the CC as the region where there is the largest left/right WM connection. We then orient it to be vertical and find principle directions, and divvy it up into however many segments you want (I think the default is 5 but this can be changed). We then grow it out laterally as far as your specify
cheers Bruce
On Mon, 19 Feb 2018, Benjamin Yeske wrote:
Hello Freesurfer Experts, I was looking through your website to see if I could find any info/papers that explained what landmarks you use for segmenting the corpus callosum, but I couldn't find anything on the topic. Could you please point me to a paper or resource that explains how freesurfer captures the corpus callosum and what landmarks it use to segment it out? We'd like to be able to hand check this region for accuracy in our TBI patients brain scans.
Thank you, Ben
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