mri_label2label --srclabel rhrh.label --srcsubject fsaverage --trgsubject SUBJ --trglabel SUBJ_rhrh --regmethod surface --hemi rh
does not produce output.
Suggestions are very wellcome.
Thanks
Stefano
----Messaggio originale---- Da: stdp82@virgilio.it Data: 20-mag-2016 19.51 A: freesurfer@nmr.mgh.harvard.edu Ogg: [Freesurfer] R: Re: R: MASK.label from fsaverage to volume in subject
space
label2label and label2vol are options?
mri_label2label --srclabel ROI.label --srcsubject fsaverage --trgsubject Control61 --trglabel prova.label --hemi rh --regmethod surface
I have tried the command line above ma the mask output is miss registered
Stefano
----Messaggio originale---- Da: Bruce Fischl fischl@nmr.mgh.harvard.edu Data: 20-mag-2016 14.38 A: stdp82@virgilio.it, "Freesurfer support list"<freesurfer@nmr.mgh.
harvard.
edu>
Ogg: Re: [Freesurfer] R: MASK.label from fsaverage to volume in subject
space
sure, that should work
cheers Bruce On Fri, 20 May 2016, stdp82@virgilio.it wrote:
Specifically, I have a .label from tksurfer and I would like to report
this
label on subj orig.nii.gz
----Messaggio originale---- Da: stdp82@virgilio.it Data: 20-mag-2016 10.36 A: <freesurfer@nmr.mgh.harvard.edu> Ogg: [Freesurfer] MASK.label from fsaverage to volume in subject spaceHi list, to trasform a MASK.label (created by tk surfer) from surface to volume is correct to use:
- mri_surf2surf to register the mask from fsaverage to subj space
2. mri_surf2vol to report the label (subj space) to volume (subj space)
Thanks.
Stefano
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