[Freesurfer] R: R: Re: R: MASK.label from fsaverage to volume in subject space

mri_label2label --srclabel rhrh.label --srcsubject fsaverage --trgsubject SUBJ --trglabel SUBJ_rhrh --regmethod surface --hemi rh

does not produce output.

Suggestions are very wellcome.

Thanks

Stefano

----Messaggio originale---- Da: stdp82@virgilio.it Data: 20-mag-2016 19.51 A: freesurfer@nmr.mgh.harvard.edu Ogg: [Freesurfer] R: Re: R: MASK.label from fsaverage to volume in subject

space

label2label and label2vol are options?

mri_label2label --srclabel ROI.label --srcsubject fsaverage --trgsubject Control61 --trglabel prova.label --hemi rh --regmethod surface

I have tried the command line above ma the mask output is miss registered

Stefano

...

----Messaggio originale---- Da: Bruce Fischl fischl@nmr.mgh.harvard.edu Data: 20-mag-2016 14.38 A: stdp82@virgilio.it, "Freesurfer support list"<freesurfer@nmr.mgh.

harvard.

edu>

...

Ogg: Re: [Freesurfer] R: MASK.label from fsaverage to volume in subject

space

...

sure, that should work

cheers Bruce On Fri, 20 May 2016, stdp82@virgilio.it wrote:

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Specifically, I have a .label from tksurfer and I would like to report

this

...

...

label on subj orig.nii.gz

  ----Messaggio originale----
  Da: stdp82@virgilio.it
  Data: 20-mag-2016 10.36
  A: <freesurfer@nmr.mgh.harvard.edu>
  Ogg: [Freesurfer] MASK.label from fsaverage to volume in subject
  space

Hi list, to trasform a MASK.label (created by tk surfer) from surface to volume is correct to use:

1. mri_surf2surf to register the mask from fsaverage to subj space

2. mri_surf2vol to report the label (subj space) to volume (subj space)

Thanks.

Stefano

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